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Rs1.0
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Genome features
Detail information
Information
Chr No.
Name
Length
Organism
R2
Rs048330.1
1820
Raphanus sativus
Description
patatin-like protein 8 [BLAST2GO] | Best-Hit: PATATIN-like protein 8 [AT4G29800]
Location
Rs v1.0_R2:39337285..39339104(-)
GFF source
Rs v1.0
Region information
Type
Start
End
Strand
mRNA
39337285
39339104
-
exon
39337755
39339104
-
CDS
39337755
39339038
-
exon
39337285
39337671
-
CDS
39337354
39337671
-
Sequence
Nucleotide sequence
>Rs048330
ATGAATCGACGCTACGATAAGCCACCGCCATTGGCGGTTTCCTCCAAGGAGAATAAGAAGAAGAAGCATT
TCGTCAACCACACAGCTCCCAACACTCCCGGAAACCAAGAGAGGACTCAAGCCAGTCCAACTCTCTCGAC
GGCTCGGTCTCACGAACCGTTCATCGACTCCTCCGATGGTAAGCTCAGCTACGAGATCTTCTCTATCCTT
GAGAGCAAGTTTCTCTTCGGTTACGAAGACCCTAGGCTATCTTGGATTCCTCGTAGTCCGTTACGACCCG
GTCCCGATTCTTCCGACGCAGGACCTTCTCCGAGATCCCCGTTGACTCCGAACGGCGCCGTTCTCCCCGG
GACTCCGTCTTCTTCTTCGTTCAGGAGTCCGAGAGGGAGAATCTGCGTGTTGAGCATCGACGGCGGCGGG
ATGAGAGGTCTTTTGGCGGGAAAATCTCTGATCTATCTTGAGCAGATGCTGAAAGAGAAATCCGGCGATC
CGAACGCTCGTATCGCGGATTACTTCGACGTCGCCGCCGGATCAGGTATCGGAGGCGTGTTCTCCGCGAT
GATGTTCGCGACCAGAGACGGTAACCGCCCGATTTTCAAGGCGGAGGACACGTGGAAGTTCCTCATCAAC
AACGCAGAGAGTTTCTACAGATCAGGCGGAGGAGTAGGAGCAGGAGCGGCGATCAAACGCGTCATGAGAT
CGGGATCATCCTCCTCGTCCTCTTCCGTTTCCGCCGCGACGGCGAAGCTGGAGAAAGCAATGAAAGCGTC
GTTCGCCGATCTGACGCTCAAAGACACACTGAAACCGATCCTCATCTCCTGCTACGATCTCTCCAGCACC
GCGCCGCTTCTGTTCTCGCGCGCCGACGCGCTGGAGAGCGACAGTTTCGATTTCCGTCTCCGGGATATCT
GCCGCGCCACGTGGGCGGAGCCGGGGACGTTCGATCCGGTTCGCACGTCCTCCATCGACGGGAAAACGCG
GTGCGTTGCGGTTGGAGGTGGGCTCGCGATGAGTAATCCCACCGCGGCGGCGATAACGCACGTGTTCCAT
AACAAACAGGAGTTTCCGGCGGTTATGGGGGTGGAGGATATGCTGGTGTTGTCGCTTGGGACTGGTCAGC
TTTTTGAAGTGAATTATGATTATGAGCAAGTTAAAAACTGGCGGGTAAAAGAATGGGCCAGGCCCATGGC
GAGGATCTCTGGTGATGGATCTGCTGAGTTTGTTGATCAGGCCGTTGCTATGGGCTTTGGGCCTTACCGG
AGCAGCAACTACGTTCGTATTCAGCAGGCAAACGGATCGAGACTAGGAGCTTGTGGGCCGAATGTTGATA
CGGATCCGAGAGCAGAGAATGTAAAGAAACTTACTGAGATTGCTGATGAGATGTTGAAGCAGAACAATGT
TGAATCGGTGTTGTTCGGAAGCAAAAGGATCGGTGAAATGAGTAATTCAGATAAAATAGAGTGGTTTGCG
AACGAGCTTGTGATTGAGCAGCAAAGACGAAGTGTTAGCGCGTCTCCTACCGTGACGCTAAAGCAAGCTG
TGTCCAAAACCAACCGCAACGCTATAAACGCAACTCTCACTCTCATATCTAAAGAAAGATGA
Protein sequence
>Rs048330
MNRRYDKPPPLAVSSKENKKKKHFVNHTAPNTPGNQERTQASPTLSTARSHEPFIDSSDGKLSYEIFSIL
ESKFLFGYEDPRLSWIPRSPLRPGPDSSDAGPSPRSPLTPNGAVLPGTPSSSSFRSPRGRICVLSIDGGG
MRGLLAGKSLIYLEQMLKEKSGDPNARIADYFDVAAGSGIGGVFSAMMFATRDGNRPIFKAEDTWKFLIN
NAESFYRSGGGVGAGAAIKRVMRSGSSSSSSSVSAATAKLEKAMKASFADLTLKDTLKPILISCYDLSST
APLLFSRADALESDSFDFRLRDICRATWAEPGTFDPVRTSSIDGKTRCVAVGGGLAMSNPTAAAITHVFH
NKQEFPAVMGVEDMLVLSLGTGQLFEVNYDYEQVKNWRVKEWARPMARISGDGSAEFVDQAVAMGFGPYR
SSNYVRIQQANGSRLGACGPNVDTDPRAENVKKLTEIADEMLKQNNVESVLFGSKRIGEMSNSDKIEWFA
NELVIEQQRRSVSASPTVTLKQAVSKTNRNAINATLTLISKER
