Radish Genome Database

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Gene search result

Home > Search > Genome features

Detail information

  • Information
      Chr No. Name Length Organism
      R9 Rs460740.1 4186 Raphanus sativus
      Description dna-directed rna polymerase ii protein [BLAST2GO] | DNA-directed RNA polymerase II protein [AT1G77890]
      Location Rs v1.0_R9:8999883..9004068(-)
      GFF source Rs v1.0
  • Region information
      Type Start End Strand
      mRNA 8999883 9004068 -
      exon 9003307 9004068 -
      CDS 9003307 9003332 -
      exon 9003085 9003238 -
      CDS 9003085 9003238 -
      exon 9002711 9002799 -
      CDS 9002711 9002799 -
      exon 9002559 9002646 -
      CDS 9002559 9002646 -
      exon 9002379 9002478 -
      CDS 9002379 9002478 -
      exon 9002217 9002290 -
      CDS 9002217 9002290 -
      exon 9002071 9002142 -
      CDS 9002071 9002142 -
      exon 9001847 9001924 -
      CDS 9001847 9001924 -
      exon 9001447 9001571 -
      CDS 9001447 9001571 -
      exon 9001203 9001275 -
      CDS 9001203 9001275 -
      exon 9000959 9001020 -
      CDS 9000959 9001020 -
      exon 9000493 9000867 -
      CDS 9000493 9000867 -
      exon 9000312 9000411 -
      CDS 9000312 9000411 -
      exon 8999883 9000232 -
      CDS 9000107 9000232 -

Sequence

  • Nucleotide sequence
    • >Rs460740
      ATGGGGGAAGAGGAGATGATGTGCACCCCTCCACGCAATGACGCTAACTCTTCCTCCTCGCTTCTCAAAT
      CTTCCCGCTTCCTCCTCAATCGTACTTCGGACGCTACCTTTCACCGTCGACTTCGGAACCTTCCCCGTCA
      AATCCACCGTCCGATTTTCCCCGATCGTCTGCCATCGCTAATTTGGTTGTGTGTTGATTATGAAGATATT
      TGTGGAATCAACAGATTTGATCGCGTCGGCGGCGGCGAAGGGATAGATGGAGAGATCTATTTACATGAGT
      GCAAAACTGTGCTGGACTCGTTGAAGAGCCGTCAAGAGGTTTCATACTCGAGACTGAGCAGCTTGCTTGT
      CACTAAGGAGAGAGCGATTGTTCAGCAGTGTTGGATGGATCTGCACAACGAGAAGCTTGCTAAGTTGCGG
      GATAAGCTCGAGCTACAAGTGGAGAAGTTACAGAAAAGCAAAAGCACGTTCCGGAGACTCTCTAGCAATC
      TGAAAGAGAGATTTGACATTATTGAATCGACTAATGTTGCTTTGGAGAAGAGCCGTGTTCGACAATTAGA
      GAACCAATATTCAGATACTATTGGCAATCACTACTTAGTATATATCGAGCTTACTTCAGAACGTCTTTAT
      AAACAGGCTTTGGTTATGAAACAGATATGCAAGTTATTCCCTCTTTCCAAGGTCACGGTAGAGGGAAATA
      ACAAATATGGGAGTGGTGGACAATATGATCAAATCTGTAATGCTATCCTACCACAAGGTCTCAATCCACT
      CTCTGTTCCGCCAAAAGAGCTGGCAGCCTCTTTAGGGTACATGGTGCAGCTTCTGAATCTTGTTGTCCAT
      AAGCTCGCAGTGCCTGCACTCCATAACTTGGGTTTTGGGGGTTCTTGTTCAAGAATATGGCAACGAGATT
      CGTATTGGAATTCTCATCCATCTTCTCCAAGCGGTGAGTATCCCCTCTTTGTACCATCCCATGATTACTT
      CTCAATTGAAGGGAAAAGTTCCTGGACGGGTAGAGACACAACCAATTTTGGTGTCACTTCCCTGAAATCA
      GATGGAAGTGTAGAAGAAGATTACCATGACCTCGACGTCGTCAACCTTTCCTCCGCCTCTCCTCAATCTG
      TTGAAACGTTTAGGAATGTGCAGAGAGGGATCGCGCATATCAAGCAAAGCGTGGCTCACTTAACTGTGTA
      TGGATACAGTTCCCTGTCTATGGAAGTTCCTTCTGGAGCCTCGACTTTCGAAACATTCGCAAAGTTGTTG
      AACACATTATCTTCGATCAAGGAAGTTCAGTCTGCTCTTTCTCTTTGTTTTTCAAGTTCCAATAAACAAA
      GACATGAGCCGAACAAATCAGTGTGGAATCTGAATTCCTCAAGCTCCAGCACCATGCTGAACAGCTCTCA
      TATTCAGCCAACGTCGTGGAACAACAAAAGCTATTATAATGTTCCAAATCGAGATCCCAGCTCTATTGAC
      GAGTGGAATTTGGTCGAGTATCCTCACTTTTCACATCAAGCTTTGAAGTTCAATTTTTCCAACAAGTATT
      GA

  • Protein sequence
    • >Rs460740
      MGEEEMMCTPPRNDANSSSSLLKSSRFLLNRTSDATFHRRLRNLPRQIHRPIFPDRLPSLIWLCVDYEDI
      CGINRFDRVGGGEGIDGEIYLHECKTVLDSLKSRQEVSYSRLSSLLVTKERAIVQQCWMDLHNEKLAKLR
      DKLELQVEKLQKSKSTFRRLSSNLKERFDIIESTNVALEKSRVRQLENQYSDTIGNHYLVYIELTSERLY
      KQALVMKQICKLFPLSKVTVEGNNKYGSGGQYDQICNAILPQGLNPLSVPPKELAASLGYMVQLLNLVVH
      KLAVPALHNLGFGGSCSRIWQRDSYWNSHPSSPSGEYPLFVPSHDYFSIEGKSSWTGRDTTNFGVTSLKS
      DGSVEEDYHDLDVVNLSSASPQSVETFRNVQRGIAHIKQSVAHLTVYGYSSLSMEVPSGASTFETFAKLL
      NTLSSIKEVQSALSLCFSSSNKQRHEPNKSVWNLNSSSSSTMLNSSHIQPTSWNNKSYYNVPNRDPSSID
      EWNLVEYPHFSHQALKFNFSNKY

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