Radish Genome Database

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Gene search result

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Detail information

  • Information
      Chr No. Name Length Organism
      R9 Rs485750.1 1575 Raphanus sativus
      Description 26s proteasome non-atpase regulatory subunit rpn12a-like [BLAST2GO] | regulatory particle non-ATPase 12A [AT1G64520]
      Location Rs v1.0_R9:27724358..27725932(-)
      GFF source Rs v1.0
  • Region information
      Type Start End Strand
      mRNA 27724358 27725932 -
      exon 27725764 27725932 -
      CDS 27725764 27725868 -
      exon 27725525 27725603 -
      CDS 27725525 27725603 -
      exon 27725078 27725444 -
      CDS 27725078 27725444 -
      exon 27724880 27724991 -
      CDS 27724880 27724991 -
      exon 27724358 27724782 -
      CDS 27724642 27724782 -

Sequence

  • Nucleotide sequence
    • >Rs485750
      ATGGATCCGCAGCTAACAGAAGTATCGCAGCAGTTGGAGAGATTCAAGGCGGCGTTTGTTAGGAAAGATT
      ACAATACCTGCTCTGATCTATTGTCTCGGCTTAAGGTTCTTCTGACGAAATTCACAAGCCTTCCTCCATT
      GTTTGAGAATACTCCAAATGCTGCTCACGAGCTCACTCTTGCAAGGGATATCTACGAGCACGCTGTTGTT
      CTGAGTGTCAAAACTGAGGATCAAGACGCTTTCGAGAGAGATTTCTTCCAGCTCAAACCCTACTATGTCG
      ATGCCAGGAACCGTCTTCCACCGTCCCCACAGGAGAATCTTATCCTTGGTCTAAACCTCCTGAGGCTGCT
      TGTGCAAAACAGAATTGCTGAATTCCACACTGAGCTCGAGTTACTCTCCTCTGCTACTCTGGAGAATCCT
      TGCATCAAGCATGCCGTTGAGCTTGAGCAGTCCTTCATGGAAGGTGCCTATAACCGTGTGCTCAGTGCTA
      GACAGACCGCACCTGATGCTACTTACGTCTATTTCATGGACCTCTTGGCAAAGACCATTAGAGATGAAAT
      AGCTGGATGCAGCGAGAAAGCTTATGATTATGTCTCTATCAGCGATGCCAAGCAGATGTTGCTCTTCTCT
      TCTGATCAAGAACTCTTGACCTATGTCAATGAGGAGCACCCTGAGTGGGAAGTGAATGAAGGGTTTGTTG
      TGTTCCAGAAAGCCAAAGAAACTGCACCTTGCAAAGAGATCCCGTCTCTTCAACTCATCAACCAGACTCT
      AAGCTATGCCAGAGAGCTGGAGCGTATCGTGTAA

  • Protein sequence
    • >Rs485750
      MDPQLTEVSQQLERFKAAFVRKDYNTCSDLLSRLKVLLTKFTSLPPLFENTPNAAHELTLARDIYEHAVV
      LSVKTEDQDAFERDFFQLKPYYVDARNRLPPSPQENLILGLNLLRLLVQNRIAEFHTELELLSSATLENP
      CIKHAVELEQSFMEGAYNRVLSARQTAPDATYVYFMDLLAKTIRDEIAGCSEKAYDYVSISDAKQMLLFS
      SDQELLTYVNEEHPEWEVNEGFVVFQKAKETAPCKEIPSLQLINQTLSYARELERIV

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