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Rs1.0
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Genome features
Detail information
Information
Chr No.
Name
Length
Organism
R4
Rs163310.1
1334
Raphanus sativus
Description
cysteine proteinase like protein [BLAST2GO] | Papain family cysteine protease [AT4G16190]
Location
Rs v1.0_R4:8335441..8336774(-)
GFF source
Rs v1.0
Region information
Type
Start
End
Strand
mRNA
8335441
8336774
-
exon
8336334
8336774
-
CDS
8336334
8336774
-
exon
8336131
8336250
-
CDS
8336131
8336250
-
exon
8335811
8336057
-
CDS
8335811
8336057
-
exon
8335441
8335721
-
CDS
8335441
8335721
-
Sequence
Nucleotide sequence
>Rs163310
ATGGATCGTGTGATCTTCTTCCTCCTCCTCCTCATCGCATCCGCTTTATCGGTCTCCATCTCCGGCGAGG
TTAAAAATAATCCGATCAAGCAAGTCGTCCGGGAGGAGAACGACGAACAACTCCTCCTCAACTTAGACCA
CCAGTTCACTCTGTTCAAATCAAAGTACGAGAAGACTTACAAGAACCAGGCCGAGCACGACCACCGCTTC
CGTGTCTTCAAAGCTAACTTACGTAGAGCCAGACGTCGCCAGCTACTCGATCCCACAGCCGTCCACGGCG
TCACGCAATTCTCAGACGTCACACCGAAGGAGTTCAGCCGCAAGTATCTAGGGCTGAAACGGCGGTTCCG
TCTTCCTAACGACACTCAGCAGGCGGCGATACTTCCCACTAGCGAGCTCCCGACGGATTTCGATTGGCGT
GAGCATGGAGCCGTCACCCCCGGTTTGTGCGGATCATGCTGGTCGTTTAGTGCCACGGGAGCTCTTGAAG
GAGCACATTTTCTAGCGACTAAAGAGCTCGTCAGCCTCAGCGAGCAGCAGCTCATAGACTGCGACCATAC
GTGTGATCCACAAGACGCCAAGTCATGTGACAGTGGTTGCAGAGGAGGACTAATGAACAACGCTTTTGAG
TACACTCTCAAAACCGGCGGCCTTATGAAGGAACAAGACTATCCTTATACAGGACGTGACCGTTCTGTTT
GCAAATTCGACAAGACCATGATCGCTGCCAAAGTGTCTAACTTCAGCGTTGTTTCTGCGGATGAAGACCA
AATCGCTGCAAATCTAGTCCAGAACGGTCCTCTTGCTATTGCTATCAACGCATTGTGGATGCAAACTTAC
ATAGGAGGAGTTTCGTGCCCGTATGTATGTTCCAAGAACCAAGACCATGGAGTGCTCTTGGTTGGGTTTG
GTTCGGCGGGTTATGCACCACTCCGTCTTGAGGATAAGCCTTATTGGATCATTAAGAATTCATGGGGATC
CATGTGGGGAGAGAAGGGTTACTACAAAATCTGCAGGGGAAGTCAGAACATCTGCGGTGTGGACACGATG
GTATCTACCGTTGCTGCTGTTCATACAACACCTCAGTAG
Protein sequence
>Rs163310
MDRVIFFLLLLIASALSVSISGEVKNNPIKQVVREENDEQLLLNLDHQFTLFKSKYEKTYKNQAEHDHRF
RVFKANLRRARRRQLLDPTAVHGVTQFSDVTPKEFSRKYLGLKRRFRLPNDTQQAAILPTSELPTDFDWR
EHGAVTPGLCGSCWSFSATGALEGAHFLATKELVSLSEQQLIDCDHTCDPQDAKSCDSGCRGGLMNNAFE
YTLKTGGLMKEQDYPYTGRDRSVCKFDKTMIAAKVSNFSVVSADEDQIAANLVQNGPLAIAINALWMQTY
IGGVSCPYVCSKNQDHGVLLVGFGSAGYAPLRLEDKPYWIIKNSWGSMWGEKGYYKICRGSQNICGVDTM
VSTVAAVHTTPQ
