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Rs1.0
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Genome features
Detail information
Information
Chr No.
Name
Length
Organism
R6
Rs293560.1
3030
Raphanus sativus
Description
sdl-1 protein [BLAST2GO] | elongation defective 1 protein / ELD1 protein [AT3G08550]
Location
Rs v1.0_R6:2424882..2427911(+)
GFF source
Rs v1.0
Region information
Type
Start
End
Strand
mRNA
2424882
2427911
+
exon
2424882
2425408
+
CDS
2425028
2425408
+
exon
2425515
2425664
+
CDS
2425515
2425664
+
exon
2425788
2425840
+
CDS
2425788
2425840
+
exon
2425939
2426047
+
CDS
2425939
2426047
+
exon
2426128
2426262
+
CDS
2426128
2426262
+
exon
2426379
2426423
+
CDS
2426379
2426423
+
exon
2426531
2426718
+
CDS
2426531
2426718
+
exon
2426867
2427008
+
CDS
2426867
2427008
+
exon
2427125
2427171
+
CDS
2427125
2427171
+
exon
2427291
2427378
+
CDS
2427291
2427378
+
exon
2427467
2427911
+
CDS
2427467
2427712
+
Sequence
Nucleotide sequence
>Rs293560
ATGAAATCGATGCACCGAGCTCCCCTAATCTCTTCTTCCTCCTCCTCTTCCTCAAGCAACTCTTTCGTCT
CAAGGCTTCTCCTTCTATTGACTCTCCTCCCAGTCTCCCTCGCCTGCCTCGCCTTCGTCCTCCAATGGCG
AGGCGGCGGCCTCGCCGATCCCGCCTCCGCTTCCATCGCCTCCTCGACCTCAGTCCCTGGAAGCGTCGGC
TCCGATCTCAACCACGAGGTGTTTCCGGGGATGGAGACTGTTTCATCCGTCTCCCCGAAAGCTCACCAGT
CCTCATCATCAGACTGCTCGAATCTAGCTAGAAGCTCTTCCCCTTCGTTTCCTTACTACGGTGATTGGAA
GTTCGGTGTTGATTCTAACTTAAAGCCTAAGATATGTATAACGACTAGCACATCAGCAGGATTGGATCAG
ATTTTGCCGTGGATGTTCTACCATAAGGTTCTTGGCGTCTCCACTTTTTTCCTTTTCGTTGAAGGGAAAG
CTGCTACGCCCGCCATCTCTAAAGTGCTCGAGTCTATTCCTGGGGTTAAGGTGATATACAGGACAAAAGA
TCTAGAGGAGAAGCAGGCAAAGAGTCGGATTTGGAATGAGACGTGGCTATCTTCGTTCTTTTACAAGCCA
TGCAATTACGAGTTGTTTGTTAAGCAATCTCTCAACATGGAAATGGCTATTGTCATGGCAAGGGATGCGG
GCATGGAATGGATACTTCATCTTGATACAGATGAGCTGATATACCCAGCAGGTGCTCGTGAGTACTCGTT
GAGACGGTTGCTTCTTGATGTTCCTCCAAATGTGGATATGGTTATTTTCCCAAATTATGAAAGCAGCGTA
GAAAGAGATGATATCAAGGATCCTTTCACAGAGGTGTCAATGTTTAAAAAGAACTATGACCATCTTCCAA
AAGATACATATTTTGGAATGTACAAAGAAGCAACCCGAAACAATCCAAACTACTTCTTGACTTATGGAAA
CGGCAAATCAGTTGCTCGGGTTCAAGACCACCTCCGACCAAATGGAGCACACAGATGGCATAATTACATG
AAAACTCCCAATGAGATAAAACTGGAGGAGGCTGCTGTCTTACACTACACATATGCCAAGTTCTCTGACC
TAACATCCAGGCGTGACCGATGTGGCTGCAAGCCTACAAAAGAAGACGTGAAAAGATGCTTTATGTTGGA
TTTCGATAGATCTGCATTTATAATTGCGTCAACAGCAACTGAAGATGAAATGATAAGCTGGTACCGTGAA
CATGTTGTGTGGGGAGACAAAGAGGTGAAGATGAAACTCCTTAGGAAGGGTATTCTGACTCGCATTTATT
CACCAATGGTTGTTATACAAGCATTGAAAGAGTCTGGTGTGTTCAGCTCGGTTGTCTCATCAGCTTCAAC
AAATCTTTCAAAGAAACAGTTCTTAGCATCAATGAACAAAAGCAACTCTTCATCTGATTCCCTTCCTTCA
AAGGAAAAGGAGTCTCAGGGCGTCTCAGCAAGGCACCTTCTAGGAACTGAATCAGCTATCCCTCCTTTAT
CACCTCCTGGGATGGAGCACGCTAGATTTGTCACAGAGGATTAA
Protein sequence
>Rs293560
MKSMHRAPLISSSSSSSSSNSFVSRLLLLLTLLPVSLACLAFVLQWRGGGLADPASASIASSTSVPGSVG
SDLNHEVFPGMETVSSVSPKAHQSSSSDCSNLARSSSPSFPYYGDWKFGVDSNLKPKICITTSTSAGLDQ
ILPWMFYHKVLGVSTFFLFVEGKAATPAISKVLESIPGVKVIYRTKDLEEKQAKSRIWNETWLSSFFYKP
CNYELFVKQSLNMEMAIVMARDAGMEWILHLDTDELIYPAGAREYSLRRLLLDVPPNVDMVIFPNYESSV
ERDDIKDPFTEVSMFKKNYDHLPKDTYFGMYKEATRNNPNYFLTYGNGKSVARVQDHLRPNGAHRWHNYM
KTPNEIKLEEAAVLHYTYAKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRSAFIIASTATEDEMISWYRE
HVVWGDKEVKMKLLRKGILTRIYSPMVVIQALKESGVFSSVVSSASTNLSKKQFLASMNKSNSSSDSLPS
KEKESQGVSARHLLGTESAIPPLSPPGMEHARFVTED
