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Genome features
Detail information
Information
Chr No.
Name
Length
Organism
R5
Rs536440.1
2400
Raphanus sativus
Description
magnesium-protoporphyrin ix monomethyl ester [BLAST2GO] | dicarboxylate diiron protein, putative (Crd1) [AT3G56940]
Location
Rs v1.0_R5:29557093..29559492(+)
GFF source
Rs v1.0
Region information
Type
Start
End
Strand
mRNA
29557093
29559492
+
exon
29557093
29557623
+
CDS
29557150
29557623
+
exon
29558393
29558457
+
CDS
29558393
29558457
+
exon
29558541
29558868
+
CDS
29558541
29558868
+
exon
29558948
29559046
+
CDS
29558948
29559046
+
exon
29559119
29559492
+
CDS
29559119
29559382
+
Sequence
Nucleotide sequence
>Rs536440
ATGGCAGCTGAAATGATGTTAGTGAAGCCAATCTCCCAATTCGCATCTCCAAAGCTCACCAACTCGAGGA
CATGCCTCACCAGCCGACGTTTCTCCACCGTGATCAGAATGTCAGCCACCTCCACGCCGCCGCCTCCGGC
CACCGCAACCTCTAAGTCCAAGAAGGGCACGAAGAAGGAGATTAACGAGTCGCTTCTGACACCGAGGTTC
TACACTACGGACTTCGAGGAGATGGAGCAGCTTTTCAACACGGAGATCAACAAGAACCTTAACGAGGAAG
AGTTCATTGCTCTGCTTCAAGAGTTTAAGACTGATTACAATCAGACACATTTCGTGAGGAACAAGGAGTT
CAAAGAAGCAGCGGACAAGTTGCAGGGTCCTCTAAGACAGATCTTCGTTGAGTTTCTTGAGCGGTCTTGT
ACTGCTGAGTTCTCTGGTTTCCTTCTCTACAAGGAGCTTGGTAGAAGGCTCAAGAAAACAAACCCTGTTG
TGGCTGAGATCTTCTCTCTTATGTCCAGAGATGAAGCAAGACATGCCGGGTTCTTGAACAAGGGTTTGTC
TGATTTCAACTTGGCTCTTGACTTGGGTTTCTTGACAAAGGCAAGGAAATACACTTTCTTCAAACCCAAG
TTCATCTTCTACGCCACTTACTTGTCCGAGAAAATCGGGTACTGGAGATACATCACAATCTACAGACACC
TCAAGCAAAACCCTGAGTTCCAGTGTTACCCTATCTTCAAGTACTTCGAGAACTGGTGCCAAGACGAGAA
CCGTCATGGAGATTTCTTCTCTGCTTTGATGAAAGCTCAGCCTCAGTTCCTCAATGACTGGCAAGCCAAG
CTCTGGTCTCGTTTCTTCTGCCTCTCGGTTTATGTGACCATGTACCTCAACGATTGTCAAAGAACTGATT
TCTACGAGGGTATTGGGTTAAACACCAAGGAGTTTGACATGCACGTCATCATTGAGACAAACCGGACCAC
GGCAAGGATATTCCCAGCTGTGTTGGATGTTGAGAACCCTGAGTTCAAGAGGAAGCTAGATAGAATGGTT
GTGATCAATGAGAAGCTGATGGCTGTAGGACAAACTGATGATCCTTCCTTTGTCAAGAACCTCAAGAGGA
TTCCTCTCATTGCTGGTCTAGTCTCTGAGATCTTGGCTGCTTATCTCATGCCTCCTGTTGAGTCTGGATC
TGTTGATTTCGCCGAGTTTGAGCCTAATCTTGTCTATTAG
Protein sequence
>Rs536440
MAAEMMLVKPISQFASPKLTNSRTCLTSRRFSTVIRMSATSTPPPPATATSKSKKGTKKEINESLLTPRF
YTTDFEEMEQLFNTEINKNLNEEEFIALLQEFKTDYNQTHFVRNKEFKEAADKLQGPLRQIFVEFLERSC
TAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTFFKPK
FIFYATYLSEKIGYWRYITIYRHLKQNPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWQAK
LWSRFFCLSVYVTMYLNDCQRTDFYEGIGLNTKEFDMHVIIETNRTTARIFPAVLDVENPEFKRKLDRMV
VINEKLMAVGQTDDPSFVKNLKRIPLIAGLVSEILAAYLMPPVESGSVDFAEFEPNLVY
